ca.uhn.fhir.model.dstu.resource

Class GVFVariant.BreakpointDetail

java.lang.Object

ca.uhn.fhir.model.api.BaseElement

ca.uhn.fhir.model.api.BaseIdentifiableElement

ca.uhn.fhir.model.dstu.resource.GVFVariant.BreakpointDetail

All Implemented Interfaces:

ICompositeElement, IElement, IIdentifiableElement, IResourceBlock, ISupportsUndeclaredExtensions

Enclosing class:

GVFVariant

public static class GVFVariant.BreakpointDetail
extends BaseIdentifiableElement
implements IResourceBlock

Block class for child element: GVFVariant.breakpointDetail (Coordinate of a variant with zero length)

Definition: Coordinate of a variant with zero length

Constructor Summary

Constructors

Constructor and Description
GVFVariant.BreakpointDetail()

Method Summary

Methods

Modifier and Type	Method and Description
<T extends IElement> List<T>	getAllPopulatedChildElementsOfType(Class<T> theType) Returns a list containing all child elements matching a given type
IntegerDt	getEnd() Gets the value(s) for end (End position).
StringDt	getSeqid() Gets the value(s) for seqid (Sequence Id of the variant).
IntegerDt	getStart() Gets the value(s) for start (Start position).
CodeDt	getStrand() Gets the value(s) for strand (Strand).
boolean	isEmpty()
GVFVariant.BreakpointDetail	setEnd(int theInteger) Sets the value for end (End position)
GVFVariant.BreakpointDetail	setEnd(IntegerDt theValue) Sets the value(s) for end (End position)
GVFVariant.BreakpointDetail	setSeqid(String theString) Sets the value for seqid (Sequence Id of the variant)
GVFVariant.BreakpointDetail	setSeqid(StringDt theValue) Sets the value(s) for seqid (Sequence Id of the variant)
GVFVariant.BreakpointDetail	setStart(int theInteger) Sets the value for start (Start position)
GVFVariant.BreakpointDetail	setStart(IntegerDt theValue) Sets the value(s) for start (Start position)
GVFVariant.BreakpointDetail	setStrand(CodeDt theValue) Sets the value(s) for strand (Strand)
GVFVariant.BreakpointDetail	setStrand(String theCode) Sets the value for strand (Strand)

Methods inherited from class ca.uhn.fhir.model.api.BaseIdentifiableElement

getElementSpecificId, getId, setElementSpecificId, setId, setId

Methods inherited from class ca.uhn.fhir.model.api.BaseElement

addUndeclaredExtension, addUndeclaredExtension, addUndeclaredExtension, getAllUndeclaredExtensions, getUndeclaredExtensions, getUndeclaredExtensionsByUrl, getUndeclaredModifierExtensions, isBaseEmpty

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Methods inherited from interface ca.uhn.fhir.model.api.IIdentifiableElement

getElementSpecificId, getId, setElementSpecificId, setId, setId

Constructor Detail

GVFVariant.BreakpointDetail

public GVFVariant.BreakpointDetail()

Method Detail

isEmpty

public boolean isEmpty()

Specified by:

isEmpty in interface IElement

getAllPopulatedChildElementsOfType

public <T extends IElement> List<T> getAllPopulatedChildElementsOfType(Class<T> theType)

Description copied from interface: ICompositeElement

Returns a list containing all child elements matching a given type

Specified by:

getAllPopulatedChildElementsOfType in interface ICompositeElement

Parameters:

theType - The type to match. If set to null, all child elements will be returned

getSeqid

public StringDt getSeqid()

Gets the value(s) for seqid (Sequence Id of the variant). creating it if it does not exist. Will not return null.

Definition: Sequence Id of the variant

setSeqid

public GVFVariant.BreakpointDetail setSeqid(StringDt theValue)

Sets the value(s) for seqid (Sequence Id of the variant)

Definition: Sequence Id of the variant

setSeqid

public GVFVariant.BreakpointDetail setSeqid(String theString)

Sets the value for seqid (Sequence Id of the variant)

Definition: Sequence Id of the variant

getStart

public IntegerDt getStart()

Gets the value(s) for start (Start position). creating it if it does not exist. Will not return null.

Definition: Start position

setStart

public GVFVariant.BreakpointDetail setStart(IntegerDt theValue)

Sets the value(s) for start (Start position)

Definition: Start position

setStart

public GVFVariant.BreakpointDetail setStart(int theInteger)

Sets the value for start (Start position)

Definition: Start position

getEnd

public IntegerDt getEnd()

Gets the value(s) for end (End position). creating it if it does not exist. Will not return null.

Definition: End position

setEnd

public GVFVariant.BreakpointDetail setEnd(IntegerDt theValue)

Sets the value(s) for end (End position)

Definition: End position

setEnd

public GVFVariant.BreakpointDetail setEnd(int theInteger)

Sets the value for end (End position)

Definition: End position

getStrand

public CodeDt getStrand()

Gets the value(s) for strand (Strand). creating it if it does not exist. Will not return null.

Definition: Direction of strand

setStrand

public GVFVariant.BreakpointDetail setStrand(CodeDt theValue)

Sets the value(s) for strand (Strand)

Definition: Direction of strand

setStrand

public GVFVariant.BreakpointDetail setStrand(String theCode)

Sets the value for strand (Strand)

Definition: Direction of strand