ca.uhn.fhir.model.dstu.resource

Class Microarray.Sample

java.lang.Object

ca.uhn.fhir.model.api.BaseElement

ca.uhn.fhir.model.api.BaseIdentifiableElement

ca.uhn.fhir.model.dstu.resource.Microarray.Sample

All Implemented Interfaces:

ICompositeElement, IElement, IIdentifiableElement, IResourceBlock, ISupportsUndeclaredExtensions

Enclosing class:

Microarray

public static class Microarray.Sample
extends BaseIdentifiableElement
implements IResourceBlock

Block class for child element: Microarray.sample (Sample)

Definition: Sample of a grid on the chip

Constructor Summary

Constructors

Constructor and Description
Microarray.Sample()

Method Summary

Methods

Modifier and Type	Method and Description
<T extends IElement> List<T>	getAllPopulatedChildElementsOfType(Class<T> theType) Returns a list containing all child elements matching a given type
Microarray.SampleGene	getGene() Gets the value(s) for gene (Gene of study).
StringDt	getIdentity() Gets the value(s) for identity (Id of the sample).
DecimalDt	getIntensity() Gets the value(s) for intensity (Intensity).
BooleanDt	getIsControl() Gets the value(s) for isControl (Control).
CodeableConceptDt	getOrganism() Gets the value(s) for organism (Sample).
Microarray.SampleSpecimen	getSpecimen() Gets the value(s) for specimen (Organism).
boolean	isEmpty()
Microarray.Sample	setGene(Microarray.SampleGene theValue) Sets the value(s) for gene (Gene of study)
Microarray.Sample	setIdentity(String theString) Sets the value for identity (Id of the sample)
Microarray.Sample	setIdentity(StringDt theValue) Sets the value(s) for identity (Id of the sample)
Microarray.Sample	setIntensity(BigDecimal theValue) Sets the value for intensity (Intensity)
Microarray.Sample	setIntensity(DecimalDt theValue) Sets the value(s) for intensity (Intensity)
Microarray.Sample	setIntensity(double theValue) Sets the value for intensity (Intensity)
Microarray.Sample	setIntensity(long theValue) Sets the value for intensity (Intensity)
Microarray.Sample	setIsControl(boolean theBoolean) Sets the value for isControl (Control)
Microarray.Sample	setIsControl(BooleanDt theValue) Sets the value(s) for isControl (Control)
Microarray.Sample	setOrganism(CodeableConceptDt theValue) Sets the value(s) for organism (Sample)
Microarray.Sample	setSpecimen(Microarray.SampleSpecimen theValue) Sets the value(s) for specimen (Organism)

Methods inherited from class ca.uhn.fhir.model.api.BaseIdentifiableElement

getElementSpecificId, getId, setElementSpecificId, setId, setId

Methods inherited from class ca.uhn.fhir.model.api.BaseElement

addUndeclaredExtension, addUndeclaredExtension, addUndeclaredExtension, getAllUndeclaredExtensions, getUndeclaredExtensions, getUndeclaredExtensionsByUrl, getUndeclaredModifierExtensions, isBaseEmpty

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Methods inherited from interface ca.uhn.fhir.model.api.IIdentifiableElement

getElementSpecificId, getId, setElementSpecificId, setId, setId

Constructor Detail

Microarray.Sample

public Microarray.Sample()

Method Detail

isEmpty

public boolean isEmpty()

Specified by:

isEmpty in interface IElement

getAllPopulatedChildElementsOfType

public <T extends IElement> List<T> getAllPopulatedChildElementsOfType(Class<T> theType)

Description copied from interface: ICompositeElement

Returns a list containing all child elements matching a given type

Specified by:

getAllPopulatedChildElementsOfType in interface ICompositeElement

Parameters:

theType - The type to match. If set to null, all child elements will be returned

getIdentity

public StringDt getIdentity()

Gets the value(s) for identity (Id of the sample). creating it if it does not exist. Will not return null.

Definition: Id of the sample

setIdentity

public Microarray.Sample setIdentity(StringDt theValue)

Sets the value(s) for identity (Id of the sample)

Definition: Id of the sample

setIdentity

public Microarray.Sample setIdentity(String theString)

Sets the value for identity (Id of the sample)

Definition: Id of the sample

getOrganism

public CodeableConceptDt getOrganism()

Gets the value(s) for organism (Sample). creating it if it does not exist. Will not return null.

Definition: Organism that the sample belong s to

setOrganism

public Microarray.Sample setOrganism(CodeableConceptDt theValue)

Sets the value(s) for organism (Sample)

Definition: Organism that the sample belong s to

getSpecimen

public Microarray.SampleSpecimen getSpecimen()

Gets the value(s) for specimen (Organism). creating it if it does not exist. Will not return null.

Definition: Specimen used on the grid

setSpecimen

public Microarray.Sample setSpecimen(Microarray.SampleSpecimen theValue)

Sets the value(s) for specimen (Organism)

Definition: Specimen used on the grid

getGene

public Microarray.SampleGene getGene()

Gets the value(s) for gene (Gene of study). creating it if it does not exist. Will not return null.

Definition: Gene of study

setGene

public Microarray.Sample setGene(Microarray.SampleGene theValue)

Sets the value(s) for gene (Gene of study)

Definition: Gene of study

getIntensity

public DecimalDt getIntensity()

Gets the value(s) for intensity (Intensity). creating it if it does not exist. Will not return null.

Definition: Intensity(expression) of the gene

setIntensity

public Microarray.Sample setIntensity(DecimalDt theValue)

Sets the value(s) for intensity (Intensity)

Definition: Intensity(expression) of the gene

setIntensity

public Microarray.Sample setIntensity(long theValue)

Sets the value for intensity (Intensity)

Definition: Intensity(expression) of the gene

setIntensity

public Microarray.Sample setIntensity(double theValue)

Sets the value for intensity (Intensity)

Definition: Intensity(expression) of the gene

setIntensity

public Microarray.Sample setIntensity(BigDecimal theValue)

Sets the value for intensity (Intensity)

Definition: Intensity(expression) of the gene

getIsControl

public BooleanDt getIsControl()

Gets the value(s) for isControl (Control). creating it if it does not exist. Will not return null.

Definition: Whether the grid is a control in the experiment

setIsControl

public Microarray.Sample setIsControl(BooleanDt theValue)

Sets the value(s) for isControl (Control)

Definition: Whether the grid is a control in the experiment

setIsControl

public Microarray.Sample setIsControl(boolean theBoolean)

Sets the value for isControl (Control)

Definition: Whether the grid is a control in the experiment